A script written in Python that returns a consensus string and profile matrix of a given DNA string(s) in FASTA format.

Overview

Consensus_and_Profile_Matrix

A script written in Python that returns a consensus string and profile matrix of a given DNA string(s) in FASTA format.

How to use

Open the file and rename the "cons.fasta" to your input DNA strings FASTA file. OR Rename your file to cons.fasta and place it beside the script.

Output

The code will return the consensus string and save the profile matrix to a csv file.

This script was written to solve a problem on rosalind.info: https://rosalind.info/problems/cons/

Owner
Zain
Data Analyst
Zain
Python TFLite scripts for detecting objects of any class in an image without knowing their label.

Python TFLite scripts for detecting objects of any class in an image without knowing their label.

Ibai Gorordo 42 Oct 07, 2022
A Confidence-based Iterative Solver of Depths and Surface Normals for Deep Multi-view Stereo

idn-solver Paper | Project Page This repository contains the code release of our ICCV 2021 paper: A Confidence-based Iterative Solver of Depths and Su

zhaowang 43 Nov 17, 2022
Trained on Simulated Data, Tested in the Real World

Trained on Simulated Data, Tested in the Real World

livox 43 Nov 18, 2022
Spherical Confidence Learning for Face Recognition, accepted to CVPR2021.

Sphere Confidence Face (SCF) This repository contains the PyTorch implementation of Sphere Confidence Face (SCF) proposed in the CVPR2021 paper: Shen

Maths 70 Dec 09, 2022
The Few-Shot Bot: Prompt-Based Learning for Dialogue Systems

Few-Shot Bot: Prompt-Based Learning for Dialogue Systems This repository includes the dataset, experiments results, and code for the paper: Few-Shot B

Andrea Madotto 103 Dec 28, 2022
AdaDM: Enabling Normalization for Image Super-Resolution

AdaDM AdaDM: Enabling Normalization for Image Super-Resolution. You can apply BN, LN or GN in SR networks with our AdaDM. Pretrained models (EDSR*/RDN

58 Jan 08, 2023
Direct Multi-view Multi-person 3D Human Pose Estimation

Implementation of NeurIPS-2021 paper: Direct Multi-view Multi-person 3D Human Pose Estimation [paper] [video-YouTube, video-Bilibili] [slides] This is

Sea AI Lab 251 Dec 30, 2022
An OpenAI Gym environment for multi-agent car racing based on Gym's original car racing environment.

Multi-Car Racing Gym Environment This repository contains MultiCarRacing-v0 a multiplayer variant of Gym's original CarRacing-v0 environment. This env

Igor Gilitschenski 56 Nov 01, 2022
Code for Motion Representations for Articulated Animation paper

Motion Representations for Articulated Animation This repository contains the source code for the CVPR'2021 paper Motion Representations for Articulat

Snap Research 851 Jan 09, 2023
Code for "Graph-Evolving Meta-Learning for Low-Resource Medical Dialogue Generation". [AAAI 2021]

Graph Evolving Meta-Learning for Low-resource Medical Dialogue Generation Code to be further cleaned... This repo contains the code of the following p

Shuai Lin 29 Nov 01, 2022
Code for GNMR in ICDE 2021

GNMR Code for GNMR in ICDE 2021 Please unzip data files in Datasets/MultiInt-ML10M first. Run labcode_preSamp.py (with graph sampling) for ECommerce-c

7 Oct 27, 2022
Code for paper PairRE: Knowledge Graph Embeddings via Paired Relation Vectors.

PairRE Code for paper PairRE: Knowledge Graph Embeddings via Paired Relation Vectors. This implementation of PairRE for Open Graph Benchmak datasets (

Alipay 65 Dec 19, 2022
Lecture materials for Cornell CS5785 Applied Machine Learning (Fall 2021)

Applied Machine Learning (Cornell CS5785, Fall 2021) This repo contains executable course notes and slides for the Applied ML course at Cornell and Co

Volodymyr Kuleshov 103 Dec 31, 2022
Official implementation of "Generating 3D Molecules for Target Protein Binding"

Generating 3D Molecules for Target Protein Binding This is the official implementation of the GraphBP method proposed in the following paper. Meng Liu

DIVE Lab, Texas A&M University 74 Dec 07, 2022
An open source implementation of CLIP.

OpenCLIP Welcome to an open source implementation of OpenAI's CLIP (Contrastive Language-Image Pre-training). The goal of this repository is to enable

2.7k Dec 31, 2022
Self Driving RC Car Code

Derp Learning Derp Learning is a Python package that collects data, trains models, and then controls an RC car for track racing. Hardware You will nee

Not Karol 39 Dec 07, 2022
This repository contains the code for the paper 'PARM: Paragraph Aggregation Retrieval Model for Dense Document-to-Document Retrieval' published at ECIR'22.

Paragraph Aggregation Retrieval Model (PARM) for Dense Document-to-Document Retrieval This repository contains the code for the paper PARM: A Paragrap

Sophia Althammer 33 Aug 26, 2022
An open-source project for applying deep learning to medical scenarios

Auto Vaidya An open source solution for creating end-end web app for employing the power of deep learning in various clinical scenarios like implant d

Smaranjit Ghose 18 May 29, 2022
Build fully-functioning computer vision models with PyTorch

Detecto is a Python package that allows you to build fully-functioning computer vision and object detection models with just 5 lines of code. Inferenc

Alan Bi 576 Dec 29, 2022
KwaiRec: A Fully-observed Dataset for Recommender Systems (Density: Almost 100%)

KuaiRec: A Fully-observed Dataset for Recommender Systems (Density: Almost 100%) KuaiRec is a real-world dataset collected from the recommendation log

Chongming GAO (高崇铭) 70 Dec 28, 2022