Equivariant Imaging: Learning Beyond the Range Space

Related tags

Deep LearningEI
Overview

Equivariant Imaging: Learning Beyond the Range Space

arXiv GitHub Stars

Equivariant Imaging: Learning Beyond the Range Space

Dongdong Chen, Julián Tachella, Mike E. Davies.

The University of Edinburgh

In ICCV 2021 (oral)

flexible flexible Figure: Learning to image from only measurements. Training an imaging network through just measurement consistency (MC) does not significantly improve the reconstruction over the simple pseudo-inverse (). However, by enforcing invariance in the reconstructed image set, equivariant imaging (EI) performs almost as well as a fully supervised network. Top: sparse view CT reconstruction, Bottom: pixel inpainting. PSNR is shown in top right corner of the images.

EI is a new self-supervised, end-to-end and physics-based learning framework for inverse problems with theoretical guarantees which leverages simple but fundamental priors about natural signals: symmetry and low-dimensionality.

Get quickly started

  • Please find the blog post for a quick introduction of EI.
  • Please find the core implementation of EI at './ei/closure/ei.py' (ei.py).
  • Please find the 30 lines code get_started.py and the toy cs example to get started with EI.

Overview

The problem: Imaging systems capture noisy measurements of a signal through a linear operator + . We aim to learn the reconstruction function where

  • NO groundtruth data for training as most inverse problems don’t have ground-truth;
  • only a single forward operator is available;
  • has a non-trivial nullspace (e.g. ).

The challenge:

  • We have NO information about the signal set outside the range space of or .
  • It is IMPOSSIBLE to learn the signal set using alone.

The motivation:

We assume the signal set has a low-dimensional structure and is invariant to a groups of transformations (orthgonal matrix, e.g. shift, rotation, scaling, reflection, etc.) related to a group , such that and the sets and are the same. For example,

  • natural images are shift invariant.
  • in CT/MRI data, organs can be imaged at different angles making the problem invariant to rotation.

Key observations:

  • Invariance provides access to implicit operators with potentially different range spaces: where and . Obviously, should also in the signal set.
  • The composition is equivariant to the group of transformations : .

overview Figure: Learning with and without equivariance in a toy 1D signal inpainting task. The signal set consists of different scaling of a triangular signal. On the left, the dataset does not enjoy any invariance, and hence it is not possible to learn the data distribution in the nullspace of . In this case, the network can inpaint the signal in an arbitrary way (in green), while achieving zero data consistency loss. On the right, the dataset is shift invariant. The range space of is shifted via the transformations , and the network inpaints the signal correctly.

Equivariant Imaging: to learn by using only measurements , all you need is to:

  • Define:
  1. define a transformation group based on the certain invariances to the signal set.
  2. define a neural reconstruction function , e.g. where is the (approximated) pseudo-inverse of and is a UNet-like neural net.
  • Calculate:
  1. calculate as the estimation of .
  2. calculate by transforming .
  3. calculate by reconstructing from its measurement .

flowchart

  • Train: finally learn the reconstruction function by solving: +

Requirements

All used packages are listed in the Anaconda environment.yml file. You can create an environment and run

conda env create -f environment.yml

Test

We provide the trained models used in the paper which can be downloaded at Google Drive. Please put the downloaded folder 'ckp' in the root path. Then evaluate the trained models by running

python3 demo_test_inpainting.py

and

python3 demo_test_ct.py

Train

To train EI for a given inverse problem (inpainting or CT), run

python3 demo_train.py --task 'inpainting'

or run a bash script to train the models for both CT and inpainting tasks.

bash train_paper_bash.sh

Train your models

To train your EI models on your dataset for a specific inverse problem (e.g. inpainting), run

python3 demo_train.py --h
  • Note: you may have to implement the forward model (physics) if you manage to solve a new inverse problem.
  • Note: you only need to specify some basic settings (e.g. the path of your training set).

Citation

@inproceedings{chen2021equivariant,
title = {Equivariant Imaging: Learning Beyond the Range Space},
	author={Chen, Dongdong and Tachella, Juli{\'a}n and Davies, Mike E},
	booktitle={Proceedings of the International Conference on Computer Vision (ICCV)},
	year = {2021}
}
Owner
Dongdong Chen
Machine learning, Inverse problems
Dongdong Chen
CLIPort: What and Where Pathways for Robotic Manipulation

CLIPort CLIPort: What and Where Pathways for Robotic Manipulation Mohit Shridhar, Lucas Manuelli, Dieter Fox CoRL 2021 CLIPort is an end-to-end imitat

246 Dec 11, 2022
[ICCV 2021] FaPN: Feature-aligned Pyramid Network for Dense Image Prediction

FaPN: Feature-aligned Pyramid Network for Dense Image Prediction [arXiv] [Project Page] @inproceedings{ huang2021fapn, title={{FaPN}: Feature-alig

EMI-Group 175 Dec 30, 2022
Dados coletados e programas desenvolvidos no processo de iniciação científica

Iniciacao_cientifica_FAPESP_2020-14845-6 Dados coletados e programas desenvolvidos no processo de iniciação científica Os arquivos .py são os programa

1 Jan 10, 2022
DeiT: Data-efficient Image Transformers

DeiT: Data-efficient Image Transformers This repository contains PyTorch evaluation code, training code and pretrained models for DeiT (Data-Efficient

Facebook Research 3.2k Jan 06, 2023
Codecov coverage standard for Python

Python-Standard Last Updated: 01/07/22 00:09:25 What is this? This is a Python application, with basic unit tests, for which coverage is uploaded to C

Codecov 10 Nov 04, 2022
This is official implementaion of paper "Token Shift Transformer for Video Classification".

This is official implementaion of paper "Token Shift Transformer for Video Classification". We achieve SOTA performance 80.40% on Kinetics-400 val. Paper link

VideoNet 60 Dec 30, 2022
Code for Estimating Multi-cause Treatment Effects via Single-cause Perturbation (NeurIPS 2021)

Estimating Multi-cause Treatment Effects via Single-cause Perturbation (NeurIPS 2021) Single-cause Perturbation (SCP) is a framework to estimate the m

Zhaozhi Qian 9 Sep 28, 2022
Attention over nodes in Graph Neural Networks using PyTorch (NeurIPS 2019)

Intro This repository contains code to generate data and reproduce experiments from our NeurIPS 2019 paper: Boris Knyazev, Graham W. Taylor, Mohamed R

Boris Knyazev 242 Jan 06, 2023
Syllabus del curso IIC2115 - Programación como Herramienta para la Ingeniería 2022/I

IIC2115 - Programación como Herramienta para la Ingeniería Videos y tutoriales Tutorial CMD Tutorial Instalación Python y Jupyter Tutorial de git-GitH

21 Nov 09, 2022
(CVPR 2021) Lifting 2D StyleGAN for 3D-Aware Face Generation

Lifting 2D StyleGAN for 3D-Aware Face Generation Official implementation of paper "Lifting 2D StyleGAN for 3D-Aware Face Generation". Requirements You

Yichun Shi 66 Nov 29, 2022
Code for the paper: "On the Bottleneck of Graph Neural Networks and Its Practical Implications"

On the Bottleneck of Graph Neural Networks and its Practical Implications This is the official implementation of the paper: On the Bottleneck of Graph

75 Dec 22, 2022
KSAI Lite is a deep learning inference framework of kingsoft, based on tensorflow lite

KSAI Lite is a deep learning inference framework of kingsoft, based on tensorflow lite

80 Dec 27, 2022
An investigation project for SISR.

SISR-Survey An investigation project for SISR. This repository is an official project of the paper "From Beginner to Master: A Survey for Deep Learnin

Juncheng Li 79 Oct 20, 2022
This repo is about implementing different approaches of pose estimation and also is a sub-task of the smart hospital bed project :smile:

Pose-Estimation This repo is a sub-task of the smart hospital bed project which is about implementing the task of pose estimation 😄 Many thanks to th

Max 11 Oct 17, 2022
A visualisation tool for Deep Reinforcement Learning

DRLVIS - Visualising Deep Reinforcement Learning Created by Marios Sirtmatsis with the support of Alex Bäuerle. DRLVis is an application used for visu

Marios Sirtmatsis 1 Nov 04, 2021
Weakly Supervised End-to-End Learning (NeurIPS 2021)

WeaSEL: Weakly Supervised End-to-end Learning This is a PyTorch-Lightning-based framework, based on our End-to-End Weak Supervision paper (NeurIPS 202

Auton Lab, Carnegie Mellon University 131 Jan 06, 2023
A novel pipeline framework for multi-hop complex KGQA task. About the paper title: Improving Multi-hop Embedded Knowledge Graph Question Answering by Introducing Relational Chain Reasoning

Rce-KGQA A novel pipeline framework for multi-hop complex KGQA task. This framework mainly contains two modules, answering_filtering_module and relati

金伟强 -上海大学人工智能小渣渣~ 16 Nov 18, 2022
Process JSON files for neural recording sessions using Medtronic's BrainSense Percept PC neurostimulator

percept_processing This code processes JSON files for streamed neural data using Medtronic's Percept PC neurostimulator with BrainSense Technology for

Maria Olaru 3 Jun 06, 2022
Pretrained models for Jax/Flax: StyleGAN2, GPT2, VGG, ResNet.

Pretrained models for Jax/Flax: StyleGAN2, GPT2, VGG, ResNet.

Matthias Wright 169 Dec 26, 2022
implement of SwiftNet:Real-time Video Object Segmentation

SwiftNet The official PyTorch implementation of SwiftNet:Real-time Video Object Segmentation, which has been accepted by CVPR2021. Requirements Python

haochen wang 64 Dec 14, 2022