allow windows programs to call dssp/mkdssp command from wsl; rework biopython on windows (PDB -> dssp -> fasta)

Overview

dssp-wsl

Converting PDB (Protein Data Bank) file format to DSSP file format is required for generating datasets of peptides and their secondary structures.

Such a task should be permitted when using BioPython. However, on Windows, the lack of the program dssp stucks everything.

Fortunately, linux distros provide dssp or mkdssp installation, and Windows Subsystem for Linux is an easy-to-get thing. We hereby provide this simple script to wrap calling dssp/mkdssp from wsl, and you can install it via:

pip install dssp-wsl

Other than installing dssp-wsl On Windows, you should also install WSL (see hints), and use sudo apt install dssp inside the subsystem. Then you rework BioPython.

Owner
Taine Zhao
Taine Zhao
Python binding for Terraform.

Python libterraform Python binding for Terraform. Installation $ pip install libterraform NOTE Please install version 0.3.1 or above, which solves the

Prodesire 28 Dec 29, 2022
Bancos de Dados Relacionais (SQL) na AWS com Amazon RDS.

Bancos de Dados Relacionais (SQL) na AWS com Amazon RDS Explorando o Amazon RDS, um serviço de provisionamente e gerenciamento de banco de dados relac

Lucas Magalhães 1 Dec 05, 2021
Notion4ever - Python tool for export all your content of Notion page using official Notion API

NOTION4EVER Notion4ever is a small python tool that allows you to free your cont

50 Dec 30, 2022
A simple telegram bot that takes a list of files sent by the user and returns them 7zipped

A simple telegram bot that takes a list of files sent by the user and returns them 7zipped

1 Oct 28, 2022
ChannelActionsBot - Channel Actions Bot With Python

ChannelActionsBot Can be found on telegram as @ChannelActionsBot! Features Auto

Aditya 56 Dec 30, 2022
Revolt account generator. Bypassing Hcaptcha using AI solver.

RevoltGenerator Revolt account generator. Bypassing Hcaptcha using AI solver. Config settings in config.json then put your usernames / proxies. If you

&! Ѵιchy.#0110 27 Nov 01, 2022
칼만 필터는 어렵지 않아(저자 김성필) 파이썬 코드(Unofficial)

KalmanFilter_Python 칼만 필터는 어렵지 않아(저자 김성필) 책을 공부하면서, Matlab 코드를 Python으로 변환한 것입니다. Contents Part01. Recursive Filter Chapter01. Average Filter Chapter0

Donghun Park 20 Oct 28, 2022
Very Sempil Bot Auto Filter bot

SAMANTHA_BOT Very Sempil Bot Auto Filter bot ##[ # 𝐂𝐋𝐈𝐂𝐊 𝐁𝐄𝐋𝐎𝐖 𝐈𝐌𝐀𝐆𝐄 𝐓𝐎 𝐃𝐄𝐏𝐋𝐎𝐘 👇 👇 👇 Auto Filter Manuel Filter IMDB Admin Co

DARK WEBLOAD 3 Jun 27, 2022
Notification Reminder Application For Python

Notification-Reminder-Application No matter how well you set up your to-do list and calendar, you aren’t going to get things done unless you have a re

1 Nov 26, 2021
Chatbot with python code!

Chatbot Python Chatbot with python! How to Run Installation requirements. pip install -r requirements.txt Sample Chatbot The required files must be d

Mohammad Dori 3 Jul 15, 2022
A simple versatile telgeram bot written in Python using pyTelegramBotAPI library.

A simple versatile telgeram bot written in Python using pyTelegramBotAPI library.

Benyamin Zojaji 15 Jun 17, 2022
AWS DeepRacer Free Student Workshop: Run faster by using your custom waypoints

AWS DeepRacer Free Student Workshop: Run faster by using your custom waypoints Reward Function Template for waypoints def reward_function(params):

Yuen Cheuk Lam 88 Nov 27, 2022
Send alert to telegram use telegram cli

Run standalone: Rename conf.yml.example to conf.yml Change block cli(Add your api_id and hash) Install requirements.txt Run python AlertManagerTG.py I

Eugene Arkharov 1 Nov 12, 2021
Ever wanted a dashboard for making your antispam? This is it.

Ever wanted a dashboard for making your antispam? This is it.

Skelmis 1 Oct 27, 2021
Disctopia-c2 - Windows Backdoor that is controlled through Discord

Disctopia Disctopia Command and Control What is Disctopia? Disctopia is an open

Dimitris Kalopisis 218 Dec 26, 2022
This repository will (hopefully) always contain the latest version of the libProfessorP.asm.so shared object.

libPuhfessorP - Deploy Repo This repo should (hopefully) always contain the latest version of the libPuhfessorP.asm.so shared object, to be linked wit

Puhfessor P - CPSC 240 3 Sep 30, 2021
An Anime Themed Fast And Safe Group Managing Bot.

Ξ L I N Λ 👸 A Powerful, Smart And Simple Group Manager bot Avaiilable a latest version as Ξ L I N Λ 👸 on Telegram Self-hosting (For Devs) vps # Inst

7 Nov 12, 2022
Mixcloud API wrapper for Python and Async IO

aiomixcloud Mixcloud API wrapper for Python and Async IO aiomixcloud is a wrapper library for the HTTP API of Mixcloud. It supports asynchronous opera

Aristotelis Mikropoulos 26 Dec 31, 2022
A Discord Self-Bot in Python

👨‍💻 Discord Self Bot 👨‍💻 A Discord Self-Bot in Python by natrix Installation Run: selfbot.bat Python: version : 3.8 Modules

natrix_dev 3 Oct 02, 2022
Auto-updater for the Northstar Titanfall 2 client

northstar-updater Auto-updater for the Northstar Titanfall 2 client Usage Put the exe into your Titanfall 2 directory next to Titanfall2.exe Then, whe

7 Nov 25, 2022