OMLT: Optimization and Machine Learning Toolkit

Overview
OMLT CI Status https://codecov.io/gh/cog-imperial/OMLT/branch/main/graph/badge.svg?token=9U7WLDINJJ

OMLT: Optimization and Machine Learning Toolkit

OMLT is a Python package for representing machine learning models (neural networks and gradient-boosted trees) within the Pyomo optimization environment. The package provides various optimization formulations for machine learning models (such as full-space, reduced-space, and MILP) as well as an interface to import sequential Keras and general ONNX models.

Please reference the preprint of this software package as:

@misc{ceccon2022omlt,
     title={OMLT: Optimization & Machine Learning Toolkit},
     author={Ceccon, F. and Jalving, J. and Haddad, J. and Thebelt, A. and Tsay, C. and Laird, C. D. and Misener, R.},
     year={2022},
     eprint={2202.02414},
     archivePrefix={arXiv},
     primaryClass={stat.ML}
}

Examples

import tensorflow
import pyomo.environ as pyo
from omlt import OmltBlock, OffsetScaling
from omlt.neuralnet import FullSpaceNNFormulation, NetworkDefinition
from omlt.io import load_keras_sequential

#load a Keras model
nn = tensorflow.keras.models.load_model('tests/models/keras_linear_131_sigmoid', compile=False)

#create a Pyomo model with an OMLT block
model = pyo.ConcreteModel()
model.nn = OmltBlock()

#the neural net contains one input and one output
model.input = pyo.Var()
model.output = pyo.Var()

#apply simple offset scaling for the input and output
scale_x = (1, 0.5)       #(mean,stdev) of the input
scale_y = (-0.25, 0.125) #(mean,stdev) of the output
scaler = OffsetScaling(offset_inputs=[scale_x[0]],
                    factor_inputs=[scale_x[1]],
                    offset_outputs=[scale_y[0]],
                    factor_outputs=[scale_y[1]])

#provide bounds on the input variable (e.g. from training)
scaled_input_bounds = {0:(0,5)}

#load the keras model into a network definition
net = load_keras_sequential(nn,scaler,scaled_input_bounds)

#multiple formulations of a neural network are possible
#this uses the default NeuralNetworkFormulation object
formulation = FullSpaceNNFormulation(net)

#build the formulation on the OMLT block
model.nn.build_formulation(formulation)

#query inputs and outputs, as well as scaled inputs and outputs
model.nn.inputs
model.nn.outputs
model.nn.scaled_inputs
model.nn.scaled_outputs

#connect pyomo model input and output to the neural network
@model.Constraint()
def connect_input(mdl):
    return mdl.input == mdl.nn.inputs[0]

@model.Constraint()
def connect_output(mdl):
    return mdl.output == mdl.nn.outputs[0]

#solve an inverse problem to find that input that most closely matches the output value of 0.5
model.obj = pyo.Objective(expr=(model.output - 0.5)**2)
status = pyo.SolverFactory('ipopt').solve(model, tee=False)
print(pyo.value(model.input))
print(pyo.value(model.output))

Development

OMLT uses tox to manage development tasks:

  • tox -av to list available tasks
  • tox to run tests
  • tox -e lint to check formatting and code styles
  • tox -e format to automatically format files
  • tox -e docs to build the documentation
  • tox -e publish to publish the package to PyPi

Contributors

GitHub Name Acknowledgements
jalving Jordan Jalving This work was funded by Sandia National Laboratories, Laboratory Directed Research and Development program
fracek Francesco Ceccon This work was funded by an Engineering & Physical Sciences Research Council Research Fellowship [GrantNumber EP/P016871/1]
carldlaird Carl D. Laird Initial work was funded by Sandia National Laboratories, Laboratory Directed Research and Development program. Current work supported by Carnegie Mellon University.
tsaycal Calvin Tsay This work was funded by an Engineering & Physical Sciences Research Council Research Fellowship [GrantNumber EP/T001577/1], with additional support from an Imperial College Research Fellowship.
thebtron Alexander Thebelt This work was supported by BASF SE, Ludwigshafen am Rhein.
Owner
C⚙G - Imperial College London
Computational Optimisation Group @ Imperial College London
C⚙G - Imperial College London
Cascading Feature Extraction for Fast Point Cloud Registration (BMVC 2021)

Cascading Feature Extraction for Fast Point Cloud Registration This repository contains the source code for the paper [Arxive link comming soon]. Meth

7 May 26, 2022
[CVPR 2020] 3D Photography using Context-aware Layered Depth Inpainting

[CVPR 2020] 3D Photography using Context-aware Layered Depth Inpainting [Paper] [Project Website] [Google Colab] We propose a method for converting a

Virginia Tech Vision and Learning Lab 6.2k Jan 01, 2023
Pytorch implementations of Bayes By Backprop, MC Dropout, SGLD, the Local Reparametrization Trick, KF-Laplace, SG-HMC and more

Bayesian Neural Networks Pytorch implementations for the following approximate inference methods: Bayes by Backprop Bayes by Backprop + Local Reparame

1.4k Jan 07, 2023
A PyTorch implementation of "SimGNN: A Neural Network Approach to Fast Graph Similarity Computation" (WSDM 2019).

SimGNN ⠀⠀⠀ A PyTorch implementation of SimGNN: A Neural Network Approach to Fast Graph Similarity Computation (WSDM 2019). Abstract Graph similarity s

Benedek Rozemberczki 534 Dec 25, 2022
Worktory is a python library created with the single purpose of simplifying the inventory management of network automation scripts.

Worktory is a python library created with the single purpose of simplifying the inventory management of network automation scripts.

Renato Almeida de Oliveira 18 Aug 31, 2022
A curated list of references for MLOps

A curated list of references for MLOps

Larysa Visengeriyeva 9.3k Jan 07, 2023
D2Go is a toolkit for efficient deep learning

D2Go D2Go is a production ready software system from FacebookResearch, which supports end-to-end model training and deployment for mobile platforms. W

Facebook Research 744 Jan 04, 2023
A library for implementing Decentralized Graph Neural Network algorithms.

decentralized-gnn A package for implementing and simulating decentralized Graph Neural Network algorithms for classification of peer-to-peer nodes. De

Multimedia Knowledge and Social Analytics Lab 5 Nov 07, 2022
Auto-Lama combines object detection and image inpainting to automate object removals

Auto-Lama Auto-Lama combines object detection and image inpainting to automate object removals. It is build on top of DE:TR from Facebook Research and

44 Dec 09, 2022
Dense Unsupervised Learning for Video Segmentation (NeurIPS*2021)

Dense Unsupervised Learning for Video Segmentation This repository contains the official implementation of our paper: Dense Unsupervised Learning for

Visual Inference Lab @TU Darmstadt 173 Dec 26, 2022
Code for the CVPR2021 workshop paper "Noise Conditional Flow Model for Learning the Super-Resolution Space"

NCSR: Noise Conditional Flow Model for Learning the Super-Resolution Space Official NCSR training PyTorch Code for the CVPR2021 workshop paper "Noise

57 Oct 03, 2022
Tutorial on scikit-learn and IPython for parallel machine learning

Parallel Machine Learning with scikit-learn and IPython Video recording of this tutorial given at PyCon in 2013. The tutorial material has been rearra

Olivier Grisel 1.6k Dec 26, 2022
TensorFlow implementation of Elastic Weight Consolidation

Elastic weight consolidation Introduction A TensorFlow implementation of elastic weight consolidation as presented in Overcoming catastrophic forgetti

James Stokes 67 Oct 11, 2022
Official codes: Self-Supervised Learning by Estimating Twin Class Distribution

TWIST: Self-Supervised Learning by Estimating Twin Class Distributions Codes and pretrained models for TWIST: @article{wang2021self, title={Self-Sup

Bytedance Inc. 85 Dec 15, 2022
Code for the paper titled "Prabhupadavani: A Code-mixed Speech Translation Data for 25 languages"

Prabhupadavani: A Code-mixed Speech Translation Data for 25 languages Code for the paper titled "Prabhupadavani: A Code-mixed Speech Translation Data

Ayush Daksh 12 Dec 01, 2022
A python script to dump all the challenges locally of a CTFd-based Capture the Flag.

A python script to dump all the challenges locally of a CTFd-based Capture the Flag. Features Connects and logins to a remote CTFd instance. Dumps all

Podalirius 77 Dec 07, 2022
Builds a LoRa radio frequency fingerprint identification (RFFI) system based on deep learning techiniques

This project builds a LoRa radio frequency fingerprint identification (RFFI) system based on deep learning techiniques.

20 Dec 30, 2022
HashNeRF-pytorch - Pure PyTorch Implementation of NVIDIA paper on Instant Training of Neural Graphics primitives

HashNeRF-pytorch Instant-NGP recently introduced a Multi-resolution Hash Encodin

Yash Sanjay Bhalgat 616 Jan 06, 2023
Official PyTorch implementation of Joint Object Detection and Multi-Object Tracking with Graph Neural Networks

This is the official PyTorch implementation of our paper: "Joint Object Detection and Multi-Object Tracking with Graph Neural Networks". Our project website and video demos are here.

Richard Wang 443 Dec 06, 2022
ViViT: Curvature access through the generalized Gauss-Newton's low-rank structure

ViViT is a collection of numerical tricks to efficiently access curvature from the generalized Gauss-Newton (GGN) matrix based on its low-rank structure. Provided functionality includes computing

Felix Dangel 12 Dec 08, 2022