当前位置：网站首页>TASSEL software imports plink format file error

TASSEL software imports plink format file error

I introduced the SNP data in Excel before (How to change the SNP data in Excel format into plinkFormat ), the method of converting to plink, if you want to import into plink format, an error will be reported:

Error: Display exceeds range

problem: string index out of range: 30 file

Because the plink encoding is in the format of AA TT, it can only be changed to the format of A A T T.

Error reporting plink data: It can be seen that the two GG CCs are continuous.

Use --recode to process it, change it to test and read it again:

plink --file file --recode --out test

View correct plink format:

Use TASSEL to read:

Read successfully:

Done!!!

版权声明
本文为[The release of self breeding data analysis]所创，转载请带上原文链接，感谢
https://yzsam.com/2022/221/202208090413555252.html