Kaggle: Cell Instance Segmentation

Overview

Kaggle: Cell Instance Segmentation

CI complete testing Code formatting codecov pre-commit.ci status

The goal of this challenge is to detect cells in microscope images.

Sample brain visual

with simple view on how many cels have been annotated per image:

Sample brain visual

Experimentation

install this tooling

A simple way how to use this basic functions:

! pip install https://github.com/Borda/kaggle_cell-inst-segm/archive/refs/heads/main.zip

run notebooks in Kaggle

local notebooks

  • TBD

some results

Training progress with EfficientNet3D with training for 10 epochs > over 96% validation accuracy:

Training process

Owner
Jirka Borovec
Computer Vision & Machine Learning & Bio-Medical Imaging & DeepLearn
Jirka Borovec
Code + pre-trained models for the paper Keeping Your Eye on the Ball Trajectory Attention in Video Transformers

Motionformer This is an official pytorch implementation of paper Keeping Your Eye on the Ball: Trajectory Attention in Video Transformers. In this rep

Facebook Research 192 Dec 23, 2022
Official Implement of CVPR 2021 paper “Cross-Modal Collaborative Representation Learning and a Large-Scale RGBT Benchmark for Crowd Counting”

RGBT Crowd Counting Lingbo Liu, Jiaqi Chen, Hefeng Wu, Guanbin Li, Chenglong Li, Liang Lin. "Cross-Modal Collaborative Representation Learning and a L

37 Dec 08, 2022
10th place solution for Google Smartphone Decimeter Challenge at kaggle.

Under refactoring 10th place solution for Google Smartphone Decimeter Challenge at kaggle. Google Smartphone Decimeter Challenge Global Navigation Sat

12 Oct 25, 2022
A Python framework for conversational search

Chatty Goose Multi-stage Conversational Passage Retrieval: An Approach to Fusing Term Importance Estimation and Neural Query Rewriting Installation Ma

Castorini 36 Oct 23, 2022
[CVPR 2020] GAN Compression: Efficient Architectures for Interactive Conditional GANs

GAN Compression project | paper | videos | slides [NEW!] GAN Compression is accepted by T-PAMI! We released our T-PAMI version in the arXiv v4! [NEW!]

MIT HAN Lab 1k Jan 07, 2023
Code for Estimating Multi-cause Treatment Effects via Single-cause Perturbation (NeurIPS 2021)

Estimating Multi-cause Treatment Effects via Single-cause Perturbation (NeurIPS 2021) Single-cause Perturbation (SCP) is a framework to estimate the m

Zhaozhi Qian 9 Sep 28, 2022
An self sufficient AI that crawls the web to learn how to generate art from keywords

Roxx-IO - The Smart Artist AI! TO DO / IDEAS Implement Web-Scraping Functionality Figure out a less annoying (and an off button for it) text to speech

Tatz 5 Mar 21, 2022
PyTorch code for the paper "Curriculum Graph Co-Teaching for Multi-target Domain Adaptation" (CVPR2021)

PyTorch code for the paper "Curriculum Graph Co-Teaching for Multi-target Domain Adaptation" (CVPR2021) This repo presents PyTorch implementation of M

Evgeny 79 Dec 19, 2022
FedMM: Saddle Point Optimization for Federated Adversarial Domain Adaptation

This repository contains the code accompanying the paper " FedMM: Saddle Point Optimization for Federated Adversarial Domain Adaptation" Paper link: R

20 Jun 29, 2022
Riemannian Geometry for Molecular Surface Approximation (RGMolSA)

Riemannian Geometry for Molecular Surface Approximation (RGMolSA) Introduction Ligand-based virtual screening aims to reduce the cost and duration of

11 Nov 15, 2022
Official source code of Fast Point Transformer, CVPR 2022

Fast Point Transformer Project Page | Paper This repository contains the official source code and data for our paper: Fast Point Transformer Chunghyun

182 Dec 23, 2022
This is the official repository of Music Playlist Title Generation: A Machine-Translation Approach.

PlyTitle_Generation This is the official repository of Music Playlist Title Generation: A Machine-Translation Approach. The paper has been accepted by

SeungHeonDoh 6 Jan 03, 2022
Unsupervised Feature Loss (UFLoss) for High Fidelity Deep learning (DL)-based reconstruction

Unsupervised Feature Loss (UFLoss) for High Fidelity Deep learning (DL)-based reconstruction Official github repository for the paper High Fidelity De

28 Dec 16, 2022
A Lighting Pytorch Framework for Recommendation System, Easy-to-use and Easy-to-extend.

Torch-RecHub A Lighting Pytorch Framework for Recommendation Models, Easy-to-use and Easy-to-extend. 安装 pip install torch-rechub 主要特性 scikit-learn风格易用

Mincai Lai 67 Jan 04, 2023
Python implementation of Bayesian optimization over permutation spaces.

Bayesian Optimization over Permutation Spaces This repository contains the source code and the resources related to the paper "Bayesian Optimization o

Aryan Deshwal 9 Dec 23, 2022
1st place solution in CCF BDCI 2021 ULSEG challenge

1st place solution in CCF BDCI 2021 ULSEG challenge This is the source code of the 1st place solution for ultrasound image angioma segmentation task (

Chenxu Peng 30 Nov 22, 2022
This project provides the proof of the uniqueness of the equilibrium and the global asymptotic stability.

Delayed-cellular-neural-network This project provides the proof of the uniqueness of the equilibrium and the global asymptotic stability. There is als

4 Apr 28, 2022
Deep motion generator collections

GenMotion GenMotion (/gen’motion/) is a Python library for making skeletal animations. It enables easy dataset loading and experiment sharing for synt

23 May 24, 2022
Official code for 'Robust Siamese Object Tracking for Unmanned Aerial Manipulator' and offical introduction to UAMT100 benchmark

SiamSA: Robust Siamese Object Tracking for Unmanned Aerial Manipulator Demo video 📹 Our video on Youtube and bilibili demonstrates the evaluation of

Intelligent Vision for Robotics in Complex Environment 12 Dec 18, 2022
Code for paper ECCV 2020 paper: Who Left the Dogs Out? 3D Animal Reconstruction with Expectation Maximization in the Loop.

Who Left the Dogs Out? Evaluation and demo code for our ECCV 2020 paper: Who Left the Dogs Out? 3D Animal Reconstruction with Expectation Maximization

Benjamin Biggs 29 Dec 28, 2022