Scrutinizing XAI with linear ground-truth data

Overview

Pattern and Distractor

This repository contains all the experiments presented in the corresponding paper: "Scrutinizing XAI using linear ground-truth data with suppressor variables".

We use Pipfiles to create Python environments. Since we use innvestigate to create the saliency maps, and this framework uses particular dependencies, there is one extra Pipfile included in the saliency_method folder.

In three steps we can reproduce the results: (i) we generate the ground truth data, (ii) train the linear models and apply the XAI methods, (iii) run the evaluation steps and generate plots.

Generate data

Set the parameter pattern_type=0 to use the signal pattern and suppressor combination analyzed in the paper (see image above). Use pattern_type=3 to generate the data, used to produce the result in the supplementary material.

python -m data.main --path data/config.json 

Run the experiments of model agnostic XAI methods

Update the data_path parameter of the agnostic_methods/conf.json with the path to the freshly generated pickle file containing the ground truth data.

python -m agnostic_methods.main_global_explanations --path agnostic_methods/config.json

Run experiment for sample based explanation, which will take a couple hours, depending on your machine. Here update the data_path of the file agnostic_methods/config_sample_based.json.

python -m agnostic_methods.main_sample_based_explanations --path agnostic_methods/config_sample_based.json

Run experiment of saliency methods

Create a new Python environment, and run the experiments for heat-mapping methods by running through the notebook, change the file_path variable in the notebook.

compute_explanations_heatmapping.ipynb

Run evaluation and generate plots

Update the parameter data_path and results_paths of the config.json. Add the data path and the paths to the artifacts of the experiments.

python run_evaluation_and_visualization.py --path config.json
Owner
braindata lab
Braindata lab at Charité - Universitätsmedizin Berlin
braindata lab
Xview3 solution - XView3 challenge, 2nd place solution

Xview3, 2nd place solution https://iuu.xview.us/ test split aggregate score publ

Selim Seferbekov 24 Nov 23, 2022
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models

GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Model This repository is the official PyTorch implementation of GraphRNN, a graph gene

Jiaxuan 568 Dec 29, 2022
Code for Quantifying Ignorance in Individual-Level Causal-Effect Estimates under Hidden Confounding

🍐 quince Code for Quantifying Ignorance in Individual-Level Causal-Effect Estimates under Hidden Confounding 🍐 Installation $ git clone

Andrew Jesson 19 Jun 23, 2022
Just Go with the Flow: Self-Supervised Scene Flow Estimation

Just Go with the Flow: Self-Supervised Scene Flow Estimation Code release for the paper Just Go with the Flow: Self-Supervised Scene Flow Estimation,

Himangi Mittal 50 Nov 22, 2022
Animation of solving the traveling salesman problem to optimality using mixed-integer programming and iteratively eliminating sub tours

tsp-streamlit Animation of solving the traveling salesman problem to optimality using mixed-integer programming and iteratively eliminating sub tours.

4 Nov 05, 2022
Testbed of AI Systems Quality Management

qunomon Description A testbed for testing and managing AI system qualities. Demo Sorry. Not deployment public server at alpha version. Requirement Ins

AIST AIRC 15 Nov 27, 2021
An Implementation of Fully Convolutional Networks in Tensorflow.

Update An example on how to integrate this code into your own semantic segmentation pipeline can be found in my KittiSeg project repository. tensorflo

Marvin Teichmann 1.1k Dec 12, 2022
A pytorch &keras implementation and demo of Fastformer.

Fastformer Notes from the authors Pytorch/Keras implementation of Fastformer. The keras version only includes the core fastformer attention part. The

153 Dec 28, 2022
Save-restricted-v-3 - Save restricted content Bot For telegram

Save restricted content Bot Contact: Telegram A stable telegram bot to get restr

DEVANSH 11 Dec 21, 2022
Deep Text Search is an AI-powered multilingual text search and recommendation engine with state-of-the-art transformer-based multilingual text embedding (50+ languages).

Deep Text Search - AI Based Text Search & Recommendation System Deep Text Search is an AI-powered multilingual text search and recommendation engine w

19 Sep 29, 2022
Control-Robot-Arm-using-PS4-Controller - A Robotic Arm based on Raspberry Pi and Arduino that controlled by PS4 Controller

Control-Robot-Arm-using-PS4-Controller You can see all details about this Robot

MohammadReza Sharifi 5 Jan 01, 2022
Structured Edge Detection Toolbox

################################################################### # # # Structure

Piotr Dollar 779 Jan 02, 2023
Machine Translation Implement By Bi-GRU And Transformer

Seq2Seq Translation Implement By Bidirectional GRU And Transformer In Pytorch Before You Run The Code You should download the data through the link be

He Wang 2 Oct 27, 2021
这是一个mobilenet-yolov4-lite的库,把yolov4主干网络修改成了mobilenet,修改了Panet的卷积组成,使参数量大幅度缩小。

YOLOV4:You Only Look Once目标检测模型-修改mobilenet系列主干网络-在Keras当中的实现 2021年2月8日更新: 加入letterbox_image的选项,关闭letterbox_image后网络的map一般可以得到提升。

Bubbliiiing 65 Dec 01, 2022
General Assembly Capstone: NBA Game Predictor

Project 6: Predicting NBA Games Problem Statement Can I predict the results of NBA games from the back-half of a season from the opening half of the s

Adam Muhammad Klesc 1 Jan 14, 2022
A web porting for NVlabs' StyleGAN2, to facilitate exploring all kinds characteristic of StyleGAN networks

This project is a web porting for NVlabs' StyleGAN2, to facilitate exploring all kinds characteristic of StyleGAN networks. Thanks for NVlabs' excelle

K.L. 150 Dec 15, 2022
Implementation of the GVP-Transformer, which was used in the paper "Learning inverse folding from millions of predicted structures" for de novo protein design alongside Alphafold2

GVP Transformer (wip) Implementation of the GVP-Transformer, which was used in the paper Learning inverse folding from millions of predicted structure

Phil Wang 19 May 06, 2022
Unofficial JAX implementations of Deep Learning models

JAX Models Table of Contents About The Project Getting Started Prerequisites Installation Usage Contributing License Contact About The Project The JAX

107 Jan 05, 2023
[CVPR 2021] Rethinking Text Segmentation: A Novel Dataset and A Text-Specific Refinement Approach

Rethinking Text Segmentation: A Novel Dataset and A Text-Specific Refinement Approach This is the repo to host the dataset TextSeg and code for TexRNe

SHI Lab 174 Dec 19, 2022
Visual odometry package based on hardware-accelerated NVIDIA Elbrus library with world class quality and performance.

Isaac ROS Visual Odometry This repository provides a ROS2 package that estimates stereo visual inertial odometry using the Isaac Elbrus GPU-accelerate

NVIDIA Isaac ROS 343 Jan 03, 2023