DaCeML - Machine learning powered by data-centric parallel programming.

Overview

CPU CI GPU CI codecov Documentation Status

DaCeML

Machine learning powered by data-centric parallel programming.

This project adds PyTorch and ONNX model loading support to DaCe, and adds ONNX operator library nodes to the SDFG IR. With access to DaCe's rich transformation library and productive development environment, DaCeML can generate highly efficient implementations that can be executed on CPUs, GPUs and FPGAs.

The white box approach allows us to see computation at all levels of granularity: from coarse operators, to kernel implementations, and even down to every scalar operation and memory access.

IR visual example

Read more: Library Nodes

Integration

Converting PyTorch modules is as easy as adding a decorator...

@dace_module
class Model(nn.Module):
    def __init__(self, kernel_size):
        super().__init__()
        self.conv1 = nn.Conv2d(1, 4, kernel_size)
        self.conv2 = nn.Conv2d(4, 4, kernel_size)

    def forward(self, x):
        x = F.relu(self.conv1(x))
        return F.relu(self.conv2(x))

... and ONNX models can also be directly imported using the model loader:

model = onnx.load(model_path)
dace_model = ONNXModel("mymodel", model)

Read more: PyTorch Integration and Importing ONNX models.

Training

DaCeML modules support training using a symbolic automatic differentiation engine:

import torch.nn.functional as F
from daceml.pytorch import dace_module

@dace_module(backward=True)
class Net(nn.Module):
    def __init__(self):
        super().__init__()
        self.fc1 = nn.Linear(784, 120)
        self.fc2 = nn.Linear(120, 32)
        self.fc3 = nn.Linear(32, 10)
        self.ls = nn.LogSoftmax(dim=-1)

    def forward(self, x):
        x = F.relu(self.fc1(x))
        x = F.relu(self.fc2(x))
        x = self.fc3(x)
        x = self.ls(x)
        return x

x = torch.randn(8, 784)
y = torch.tensor([0, 1, 2, 3, 4, 5, 6, 7], dtype=torch.long)

model = Net()

criterion = nn.NLLLoss()
prediction = model(x)
loss = criterion(prediction, y)
# gradients can flow through model!
loss.backward()

Read more: Automatic Differentiation.

Library Nodes

DaCeML extends the DaCe IR with machine learning operators. The added nodes perform computation as specificed by the ONNX specification. DaCeML leverages high performance kernels from ONNXRuntime, as well as pure SDFG implementations that are introspectable and transformable with data centric transformations.

The nodes can be used from the DaCe python frontend.

import dace
import daceml.onnx as donnx
import numpy as np

@dace.program
def conv_program(X_arr: dace.float32[5, 3, 10, 10],
                 W_arr: dace.float32[16, 3, 3, 3]):
    output = dace.define_local([5, 16, 4, 4], dace.float32)
    donnx.ONNXConv(X=X_arr, W=W_arr, Y=output, strides=[2, 2])
    return output

X = np.random.rand(5, 3, 10, 10).astype(np.float32)
W = np.random.rand(16, 3, 3, 3).astype(np.float32)

result = conv_program(X_arr=X, W_arr=W)

Setup

The easiest way to get started is to run

make install

This will setup DaCeML in a newly created virtual environment.

For more detailed instructions, including ONNXRuntime installation, see Installation.

Development

Common development tasks are automated using the Makefile. See Development for more information.

Short PhD seminar on Machine Learning Security (Adversarial Machine Learning)

Short PhD seminar on Machine Learning Security (Adversarial Machine Learning)

141 Dec 27, 2022
Predict the income for each percentile of the population (Python) - FRENCH

05.income-prediction Predict the income for each percentile of the population (Python) - FRENCH Effectuez une prédiction de revenus Prérequis Pour ce

1 Feb 13, 2022
Official code for HH-VAEM

HH-VAEM This repository contains the official Pytorch implementation of the Hierarchical Hamiltonian VAE for Mixed-type Data (HH-VAEM) model and the s

Ignacio Peis 8 Nov 30, 2022
Gaussian Process Optimization using GPy

End of maintenance for GPyOpt Dear GPyOpt community! We would like to acknowledge the obvious. The core team of GPyOpt has moved on, and over the past

Sheffield Machine Learning Software 847 Dec 19, 2022
Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Dask, Flink and DataFlow

eXtreme Gradient Boosting Community | Documentation | Resources | Contributors | Release Notes XGBoost is an optimized distributed gradient boosting l

Distributed (Deep) Machine Learning Community 23.6k Jan 03, 2023
A fast, distributed, high performance gradient boosting (GBT, GBDT, GBRT, GBM or MART) framework based on decision tree algorithms, used for ranking, classification and many other machine learning tasks.

Light Gradient Boosting Machine LightGBM is a gradient boosting framework that uses tree based learning algorithms. It is designed to be distributed a

Microsoft 14.5k Jan 07, 2023
YouTube Spam Detection with python

YouTube Spam Detection This code deletes spam comment on youtube videos based on two characteristics (currently) If the author of the comment has a se

MohamadReza Taalebi 5 Sep 27, 2022
This is the code repository for LRM Stochastic watershed model.

LRM-Squannacook Input data for generating stochastic streamflows are observed and simulated timeseries of streamflow. their format needs to be CSV wit

1 Feb 14, 2022
MIT-Machine Learning with Python–From Linear Models to Deep Learning

MIT-Machine Learning with Python–From Linear Models to Deep Learning | One of the 5 courses in MIT MicroMasters in Statistics & Data Science Welcome t

2 Aug 23, 2022
Iris species predictor app is used to classify iris species created using python's scikit-learn, fastapi, numpy and joblib packages.

Iris Species Predictor Iris species predictor app is used to classify iris species using their sepal length, sepal width, petal length and petal width

Siva Prakash 5 Apr 05, 2022
A Lightweight Hyperparameter Optimization Tool 🚀

The mle-hyperopt package provides a simple and intuitive API for hyperparameter optimization of your Machine Learning Experiment (MLE) pipeline.

Robert Lange 137 Dec 02, 2022
🌲 Implementation of the Robust Random Cut Forest algorithm for anomaly detection on streams

🌲 Implementation of the Robust Random Cut Forest algorithm for anomaly detection on streams

Real-time water systems lab 416 Jan 06, 2023
Educational python for Neural Networks, written in pure Python/NumPy.

Educational python for Neural Networks, written in pure Python/NumPy.

127 Oct 27, 2022
Auto updating website that tracks closed & open issues/PRs on scikit-learn/scikit-learn.

Repository Status for Scikit-learn Live webpage Auto updating website that tracks closed & open issues/PRs on scikit-learn/scikit-learn. Running local

Thomas J. Fan 6 Dec 27, 2022
Machine Learning Model to predict the payment date of an invoice when it gets created in the system.

Payment-Date-Prediction Machine Learning Model to predict the payment date of an invoice when it gets created in the system.

15 Sep 09, 2022
Tribuo - A Java machine learning library

Tribuo - A Java prediction library (v4.1) Tribuo is a machine learning library in Java that provides multi-class classification, regression, clusterin

Oracle 1.1k Dec 28, 2022
A Python toolkit for rule-based/unsupervised anomaly detection in time series

Anomaly Detection Toolkit (ADTK) Anomaly Detection Toolkit (ADTK) is a Python package for unsupervised / rule-based time series anomaly detection. As

Arundo Analytics 888 Dec 30, 2022
Automated Machine Learning Pipeline with Feature Engineering and Hyper-Parameters Tuning

The mljar-supervised is an Automated Machine Learning Python package that works with tabular data. I

MLJAR 2.4k Jan 02, 2023
Neighbourhood Retrieval (Nearest Neighbours) with Distance Correlation.

Neighbourhood Retrieval with Distance Correlation Assign Pseudo class labels to datapoints in the latent space. NNDC is a slim wrapper around FAISS. N

The Learning Machines 1 Jan 16, 2022
A simple and lightweight genetic algorithm for optimization of any machine learning model

geneticml This package contains a simple and lightweight genetic algorithm for optimization of any machine learning model. Installation Use pip to ins

Allan Barcelos 8 Aug 10, 2022