Automatic data visualization in atom with the nteract data-explorer

Related tags

Data Visualizationdata-explorer
Overview

Data Explorer

Interactively explore your data directly in atom with hydrogen!

The nteract data-explorer provides automatic data visualization, so you can get a feel for your data quickly and with minimal code!

nteract data explorer in hydrogen

🚧 This is a work in progress. Please open issues and pull requests!

⚠️ As this package has some open issues with styling, the following atom themes are recommended for now:

  • 🎨 Atom One Light syntax theme
  • 🎨 Atom One Light UI theme

How to try it out:

Atom packages:

  • Install both hydrogen and the data-explorer package in atom, or in the cli: 
    apm install hydrogen data-explorer

Make sure you have installed:

Then, just start a python kernel in hydrogen and run the following code:

import pandas as pd

# Enable the table_schema option in pandas, 
# data-explorer makes this snippet available with the `dx` prefix:
pd.options.display.html.table_schema = True
pd.options.display.max_rows = None

# (Your dataframe here)
iris_filename = './iris.csv'
df1 = pd.read_csv(iris_filename)

df1
Comments
  • Failed to load the data-explorer package

    Failed to load the data-explorer package

    [Enter steps to reproduce:]

    1. ...
    2. ...

    Atom: 1.32.0 x64 Electron: 2.0.9 OS: Ubuntu 16.04.5 Thrown From: data-explorer package 0.3.1

    Stack Trace

    Failed to load the data-explorer package

    At Cannot find module '@blueprintjs/select'

Error: Cannot find module '@blueprintjs/select'
    at Module._resolveFilename (module.js:543:15)
    at Module._resolveFilename (/usr/share/atom/resources/electron.asar/common/reset-search-paths.js:35:12)
    at Function.get_Module._resolveFilename (/usr/share/atom/resources/app/static/<embedded>:11:154364)
    at Module.require (/app.asar/static/index.js:40:43)
    at require (/usr/share/atom/resources/app/static/<embedded>:11:145671)
    at /packages/data-explorer/node_modules/@nteract/transform-dataresource/lib/VizControls.js:20:15)
    at /packages/data-explorer/node_modules/@nteract/transform-dataresource/lib/VizControls.js:391:3)
    at Module.get_Module._compile (/usr/share/atom/resources/app/static/<embedded>:11:146381)
    at Object.value [as .js] (/usr/share/atom/resources/app/static/<embedded>:11:149928)
    at Module.load (module.js:561:32)
    at tryModuleLoad (module.js:504:12)
    at Function.Module._load (module.js:496:3)
    at Module.require (/app.asar/static/index.js:47:45)
    at require (/usr/share/atom/resources/app/static/<embedded>:11:145671)
    at /packages/data-explorer/node_modules/@nteract/transform-dataresource/lib/index.js:48:43)
    at /packages/data-explorer/node_modules/@nteract/transform-dataresource/lib/index.js:495:3)
    at Module.get_Module._compile (/usr/share/atom/resources/app/static/<embedded>:11:146381)
    at Object.value [as .js] (/usr/share/atom/resources/app/static/<embedded>:11:149928)
    at Module.load (module.js:561:32)
    at tryModuleLoad (module.js:504:12)
    at Function.Module._load (module.js:496:3)
    at Module.require (/app.asar/static/index.js:47:45)
    at require (/usr/share/atom/resources/app/static/<embedded>:11:145671)
    at /packages/data-explorer/lib/common.js:33:2)
    at /packages/data-explorer/lib/common.js:11:76)
    at Module.get_Module._compile (/usr/share/atom/resources/app/static/<embedded>:11:146381)
    at Object.value [as .js] (/usr/share/atom/resources/app/static/<embedded>:11:149928)
    at Module.load (module.js:561:32)
    at tryModuleLoad (module.js:504:12)
    at Function.Module._load (module.js:496:3)

    Commands

    Non-Core Packages

    data-explorer 0.3.1 
Hydrogen 2.6.0 
hydrogen-launcher 1.2.2 
hydrogen-python 0.0.7
    opened by cchlanger 10
  • Error compiling Less stylesheet

    Error compiling Less stylesheet

    Hi,

    When installing the data-explorer, I get this error:

    Line number: 3 '../node_modules/@blueprintjs/icons/lib/css/blueprint-icons.css' wasn't found. Tried - /home/lordflaron/.atom/packages/data-explorer/node_modules/@blueprintjs/icons/lib/css/blueprint-icons.css,/usr/lib/atom/node_modules/one-light-syntax/node_modules/@blueprintjs/icons/lib/css/blueprint-icons.css,/usr/lib/atom/node_modules/one-light-ui/node_modules/@blueprintjs/icons/lib/css/blueprint-icons.css,/usr/lib/atom/static/node_modules/@blueprintjs/icons/lib/css/blueprint-icons.css,/usr/lib/atom/node_modules/@blueprintjs/icons/lib/css/blueprint-icons.css,../node_modules/@blueprintjs/icons/lib/css/blueprint-icons.css

    Is there a missing dependency I need?

    Thank you so much!

    opened by amichuda 4
  • Unable to open

    Unable to open

    I installed it using apm command, and it can open another window with the name "data-explorer/docker-view", but nothing shows up. I just use cmd+enter to execute the current line "df".

    opened by zhangpanzhan 0
  • crash after clicking on hex plot

    crash after clicking on hex plot

    open data frame, click on hex bin plot. It shows up but then suddenly crashes.

    Atom: 1.35.1 x64 Electron: 2.0.18 OS: Microsoft Windows 10 Pro Thrown From: data-explorer package 0.6.0

    Stack Trace

    Uncaught Invariant Violation: Minified React error #31; visit https://reactjs.org/docs/error-decoder.html?invariant=31&args[]=Thu%20Dec%2013%202018%2012%3A01%3A51%20GMT-0800%20(Pacific%20Standard%20Time)&args[]= for the full message or use the non-minified dev environment for full errors and additional helpful warnings.

    At C:\Users\dominikschneider\.atom\packages\data-explorer\node_modules\react-dom\cjs\react-dom.production.min.js:248

Invariant Violation: Minified React error #31; visit https://reactjs.org/docs/error-decoder.html?invariant=31&args[]=Thu%20Dec%2013%202018%2012%3A01%3A51%20GMT-0800%20(Pacific%20Standard%20Time)&args[]= for the full message or use the non-minified dev environment for full errors and additional helpful warnings. 
    at ba (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:13:315)
    at /packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:14:166)
    at Bf (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:137:39)
    at /packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:141:49)
    at /packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:143:145)
    at /packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:147:131
    at /packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:164:72)
    at Tg (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:181:151)
    at bi (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:232:22)
    at ci (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:233:284)
    at Di (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:249:348)
    at Yh (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:248:144)
    at Gi (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:250:420)
    at Kb (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:39:140)
    at Dd (/packages/data-explorer/node_modules/react-dom/cjs/react-dom.production.min.js:86:249)

    Commands

         -3:17 autocomplete-plus:cancel (atom-text-editor.editor.is-focused)
     -3:16.3.0 hydrogen:run-and-move-down (input.hidden-input)
     -3:16.3.0 autocomplete-plus:cancel (atom-text-editor.editor.is-focused)
     -3:14.1.0 hydrogen:run-and-move-down (input.hidden-input)
     -3:14.1.0 autocomplete-plus:cancel (atom-text-editor.editor.is-focused)
     -3:13.6.0 hydrogen:run-and-move-down (input.hidden-input)
     -3:13.6.0 autocomplete-plus:cancel (atom-text-editor.editor.is-focused)
     -3:12.2.0 hydrogen:run-and-move-down (input.hidden-input)
     -3:12.2.0 autocomplete-plus:cancel (atom-text-editor.editor.is-focused)
     -3:11.2.0 hydrogen:run-and-move-down (input.hidden-input)
     -3:11.2.0 autocomplete-plus:cancel (atom-text-editor.editor.is-focused)
  2x -3:09.4.0 core:move-up (input.hidden-input)
  3x -2:54.5.0 core:backspace (input.hidden-input)
     -2:52.5.0 hydrogen:run (input.hidden-input)
     -2:52.5.0 autocomplete-plus:cancel (atom-text-editor.editor.is-focused.autocomplete-active)
     -2:29 settings-view:open (input.hidden-input)

    Non-Core Packages

    autocomplete-python-jedi 1.10.3-0 
data-explorer 0.6.0 
file-icons 2.1.31 
Hydrogen 2.9.0 
hydrogen-launcher 1.2.2 
MagicPython 1.1.1 
platformio-ide-terminal 2.9.1 
tablr 1.8.3
    opened by dschneiderch 0
  • column resizing issue

    column resizing issue

    Thanks for this super cool extension!

    I thought I'd point out that things go a bit haywire if you try to resize the columns. image

    I'm on Windows 10, Atom 1.34, data-explorer 0.5.0

    opened by dschneiderch 6
  • [WIP] use nteract outputs component

    [WIP] use nteract outputs component

    • [x] Make a custom outputs component that only renders data-explorer output
    • [x] Write some tests
    • [ ] Refactor and simplify the rest of the package and integrate
    • [ ] useEffects to open and close atom dock, toggle user config, and other side effects, replacing that logic in other areas of the package. (bump react to 16.8)

    This should let me up with a nicer package and some learnings to take to future packages/refactors.

    opened by BenRussert 0
Releases(v0.7.0)
Owner
Ben Russert
Video Experience team @bombbomb
Ben Russert
GitHub Repository
With Holoviews, your data visualizes itself.

HoloViews Stop plotting your data - annotate your data and let it visualize itself. HoloViews is an open-source Python library designed to make data a

HoloViz 2.3k Jan 02, 2023
Interactive plotting for Pandas using Vega-Lite

pdvega: Vega-Lite plotting for Pandas Dataframes pdvega is a library that allows you to quickly create interactive Vega-Lite plots from Pandas datafra

Altair 342 Oct 26, 2022
Area-weighted venn-diagrams for Python/matplotlib

Venn diagram plotting routines for Python/Matplotlib Routines for plotting area-weighted two- and three-circle venn diagrams. Installation The simples

Konstantin Tretyakov 400 Dec 31, 2022
A python visualization of the A* path finding algorithm

A python visualization of the A* path finding algorithm. It allows you to pick your start, end location and make obstacles and then view the process of finding the shortest path. You can also choose

Kimeon 4 Aug 02, 2022
Create charts with Python in a very similar way to creating charts using Chart.js

Create charts with Python in a very similar way to creating charts using Chart.js. The charts created are fully configurable, interactive and modular and are displayed directly in the output of the t

Nicolas H 68 Dec 08, 2022
Glue is a python project to link visualizations of scientific datasets across many files.

Glue Glue is a python project to link visualizations of scientific datasets across many files. Click on the image for a quick demo: Features Interacti

675 Dec 09, 2022
PanGraphViewer -- show panenome graph in an easy way

PanGraphViewer -- show panenome graph in an easy way Table of Contents Versions and dependences Desktop-based panGraphViewer Library installation for

16 Dec 17, 2022
Multi-class confusion matrix library in Python

Table of contents Overview Installation Usage Document Try PyCM in Your Browser Issues & Bug Reports Todo Outputs Dependencies Contribution References

Sepand Haghighi 1.3k Dec 31, 2022
Color scales in Python for humans

colorlover Color scales for humans IPython notebook: https://plot.ly/ipython-notebooks/color-scales/ import colorlover as cl from IPython.display impo

Plotly 146 Sep 25, 2022
A simple, fast, extensible python library for data validation.

Validr A simple, fast, extensible python library for data validation. Simple and readable schema 10X faster than jsonschema, 40X faster than schematic

kk 209 Sep 19, 2022
A Python wrapper of Neighbor Retrieval Visualizer (NeRV)

PyNeRV A Python wrapper of the dimensionality reduction algorithm Neighbor Retrieval Visualizer (NeRV) Compile Set up the paths in Makefile then make.

2 Aug 29, 2021
Tools for exploratory data analysis in Python

Dora Exploratory data analysis toolkit for Python. Contents Summary Setup Usage Reading Data & Configuration Cleaning Feature Selection & Extraction V

Nathan Epstein 599 Dec 25, 2022
A Jupyter - Three.js bridge

pythreejs A Python / ThreeJS bridge utilizing the Jupyter widget infrastructure. Getting Started Installation Using pip: pip install pythreejs And the

Jupyter Widgets 844 Dec 27, 2022
Python toolkit for defining+simulating+visualizing+analyzing attractors, dynamical systems, iterated function systems, roulette curves, and more

Attractors A small module that provides functions and classes for very efficient simulation and rendering of iterated function systems; dynamical syst

1 Aug 04, 2021
Investment and risk technologies maintained by Fortitudo Technologies.

Fortitudo Technologies Open Source This package allows you to freely explore open-source implementations of some of our fundamental technologies under

Fortitudo Technologies 11 Dec 14, 2022
This repository contains the raw data and a python notebook to ingest historical A&E attendance data and then use a simple Prophet model to predict the number of A&E attendances in England if the COVID-19 pandemic had not happened

ae_attendances_modelling This repository contains the raw data and a python notebook to ingest historical A&E attendance data and then use a simple Pr

Mattia Ficarelli 2 Mar 29, 2022
BGraph is a tool designed to generate dependencies graphs from Android.bp soong files.

BGraph BGraph is a tool designed to generate dependencies graphs from Android.bp soong files. Overview BGraph (for Build-Graphs) is a project aimed at

Quarkslab 10 Dec 19, 2022
I'm doing Genuary, an aritifiacilly generated month to build code that make beautiful things

Genuary 2022 I'm doing Genuary, an aritifiacilly generated month to build code that make beautiful things. Every day there is a new prompt for making

Joaquín Feltes 1 Jan 10, 2022
Plotting data from the landroid and a raspberry pi zero to a influx-db

landroid-pi-influx Plotting data from the landroid and a raspberry pi zero to a influx-db Dependancies Hardware: Landroid WR130E Raspberry Pi Zero Wif

2 Oct 22, 2021
A minimalistic wrapper around PyOpenGL to save development time

glpy glpy is pyOpenGl wrapper which lets you work with pyOpenGl easily.It is not meant to be a replacement for pyOpenGl but runs on top of pyOpenGl to

Abhinav 9 Apr 02, 2022