CS 506 - Computational Tools for Data Science
Code, slides, and notes for Boston University CS506 Fall 2021
The Final Project Repository can be found here
Code, slides, and notes for Boston University CS506 Fall 2021
The Final Project Repository can be found here
InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu
Mayavi: 3D visualization of scientific data in Python Mayavi docs: http://docs.enthought.com/mayavi/mayavi/ TVTK docs: http://docs.enthought.com/mayav
Table of contents What is PEM? Overview Installation Usage Executable Library Telegram Bot Try OPEM in Your Browser! MATLAB Issues & Bug Reports Contr
Zipline is a Pythonic algorithmic trading library. It is an event-driven system for backtesting. Zipline is currently used in production as the backte
Scholia is a python package and webapp for interaction with scholarly information in Wikidata. Webapp As a webapp, it currently runs from Wikimedia To
CKAN: The Open Source Data Portal Software CKAN is the world’s leading open-source data portal platform. CKAN makes it easy to publish, share and work
Metaflow Metaflow is a human-friendly Python/R library that helps scientists and engineers build and manage real-life data science projects. Metaflow
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your in
Cookiecutter Data Science A logical, reasonably standardized, but flexible project structure for doing and sharing data science work. Project homepage
PyMC3 is a Python package for Bayesian statistical modeling and Probabilistic Machine Learning focusing on advanced Markov chain Monte Carlo (MCMC) an
Pybliographer Pybliographer provides a framework for working with bibliographic databases. This software is licensed under the GPLv2. For more informa
Collection of useful code related to biological analysis. Much of this is discussed with examples at Blue collar bioinformatics. All code, images and
Manim is an engine for precise programatic animations, designed for creating explanatory math videos. Note, there are two versions of manim. This repo
PsychoPy is an open-source package for creating experiments in behavioral science. It aims to provide a single package that is: precise enoug
logo CoCalc Collaborative Calculation and Data Science CoCalc is a virtual online workspace for calculations, research, collaboration and authoring do
Doing_bayesian_data_analysis This repository contains the Python version of the R programs described in the great book Doing bayesian data analysis (f
Karate Club is an unsupervised machine learning extension library for NetworkX. Please look at the Documentation, relevant Paper, Promo Video, and Ext
Brachistochrone-curve This is a simple computer program made with Python on the brachistochrone curve. I decided to write it after a physics lesson on
SeqLike - flexible biological sequence objects in Python Introduction A single object API that makes working with biological sequences in Python more
Book on Julia for Data Science