This repo stores the codes for topic modeling on palliative care journals.

This repo stores the codes for topic modeling on palliative care journals.

Data Preparation

You first need to download the journal papers.

bash 1_download_pdfs.sh # To download papers from the journal `jpm`
bash 1_download_pdfs_jwh.sh # To download papers from the journal `jwh`

Environment Setup

Install all the necessary python packages.

bash 2_pdf2json_prep_env.sh

How to Run the Topic Model

Run the topic modeling on the default journal jpm:

python 3_pdf2json2topics.py

Or you can also run the topic modeling on the other journal jwh:

python 3_pdf2json2topics.py -journal_name jwh