DCSAU-Net: A Deeper and More Compact Split-Attention U-Net for Medical Image Segmentation

Last update: Dec 09, 2022

Related tags

Deep Learning DCSAU-Net

Overview

DCSAU-Net: A Deeper and More Compact Split-Attention U-Net for Medical Image Segmentation

By Qing Xu, Wenting Duan and Na He

Requirements

pytorch==1.10.0
pytorch-lightning==1.1.0
albumentations==0.3.2
seaborn
sklearn

Dataset

To apply the model on a custom dataset, the data tree should be constructed as:

    ├── data
          ├── images
                ├── image_1.png
                ├── image_2.png
                ├── image_n.png
          ├── masks
                ├── image_1.png
                ├── image_2.png
                ├── image_n.png

CSV generation

python data_split_csv.py --dataset your/data/path --size 0.9

Train

python train.py --dataset your/data/path --csvfile your/csv/path --loss dice --batch 16 --lr 0.001 --epoch 150

Evaluation

python eval_binary.py --dataset your/data/path --csvfile your/csv/path --model save_models/epoch_last.pth --debug True

Acknowledgement

The codes are modified from ResNeSt, U-Net

Owner

Qing Xu

GitHub Repository

Lacmus is a cross-platform application that helps to find people who are lost in the forest using computer vision and neural networks.

lacmus The program for searching through photos from the air of lost people in the forest using Retina Net neural nwtwork. The project is being develo

168 Dec 27, 2022

Fuzzing the Kernel Using Unicornafl and AFL++

Unicorefuzz Fuzzing the Kernel using UnicornAFL and AFL++. For details, skim through the WOOT paper or watch this talk at CCCamp19. Is it any good? ye

283 Dec 26, 2022

Visualizing Yolov5's layers using GradCam

YOLO-V5 GRADCAM I constantly desired to know to which part of an object the object-detection models pay more attention. So I searched for it, but I di

200 Jan 01, 2023

Episodic-memory - Ego4D Episodic Memory Benchmark

Ego4D Episodic Memory Benchmark EGO4D is the world's largest egocentric (first p

3 Feb 18, 2022

Simulating Sycamore quantum circuits classically using tensor network algorithm.

Simulating the Sycamore quantum supremacy circuit This repo contains data we have obtained in simulating the Sycamore quantum supremacy circuits with

46 Nov 17, 2022

Official implementation of the RAVE model: a Realtime Audio Variational autoEncoder

RAVE: Realtime Audio Variational autoEncoder Official implementation of RAVE: A variational autoencoder for fast and high-quality neural audio synthes

587 Jan 01, 2023

This repository contains code for the paper "Decoupling Representation and Classifier for Long-Tailed Recognition", published at ICLR 2020

Classifier-Balancing This repository contains code for the paper: Decoupling Representation and Classifier for Long-Tailed Recognition Bingyi Kang, Sa

820 Dec 26, 2022

OverFeat is a Convolutional Network-based image classifier and feature extractor.

OverFeat OverFeat is a Convolutional Network-based image classifier and feature extractor. OverFeat was trained on the ImageNet dataset and participat

593 Dec 08, 2022

Optimal Adaptive Allocation using Deep Reinforcement Learning in a Dose-Response Study

Optimal Adaptive Allocation using Deep Reinforcement Learning in a Dose-Response Study Supplementary Materials for Kentaro Matsuura, Junya Honda, Imad

4 Nov 01, 2022

Official pytorch implementation of "Feature Stylization and Domain-aware Contrastive Loss for Domain Generalization" ACMMM 2021 (Oral)

Feature Stylization and Domain-aware Contrastive Loss for Domain Generalization This is an official implementation of "Feature Stylization and Domain-

22 Sep 22, 2022

A complete speech segmentation system using Kaldi and x-vectors for voice activity detection (VAD) and speaker diarisation.

bbc-speech-segmenter: Voice Activity Detection & Speaker Diarization A complete speech segmentation system using Kaldi and x-vectors for voice activit

16 Oct 27, 2022

Optical machine for senses sensing using speckle and deep learning

# Senses-speckle [Remote Photonic Detection of Human Senses Using Secondary Speckle Patterns](https://doi.org/10.21203/rs.3.rs-724587/v1) paper Python

0 Sep 26, 2021

Sequence-tagging using deep learning

Classification using Deep Learning Requirements PyTorch version = 1.9.1+cu111 Python version = 3.8.10 PyTorch-Lightning version = 1.4.9 Huggingface

2 Dec 20, 2022

The PASS dataset: pretrained models and how to get the data - PASS: Pictures without humAns for Self-Supervised Pretraining

249 Dec 22, 2022

DCSAU-Net: A Deeper and More Compact Split-Attention U-Net for Medical Image Segmentation

Related tags

Overview

DCSAU-Net: A Deeper and More Compact Split-Attention U-Net for Medical Image Segmentation

Requirements

Dataset

CSV generation

Train

Evaluation

Acknowledgement

Owner

Qing Xu

Lacmus is a cross-platform application that helps to find people who are lost in the forest using computer vision and neural networks.

Fuzzing the Kernel Using Unicornafl and AFL++

Visualizing Yolov5's layers using GradCam

Episodic-memory - Ego4D Episodic Memory Benchmark

Simulating Sycamore quantum circuits classically using tensor network algorithm.

Official implementation of the RAVE model: a Realtime Audio Variational autoEncoder

This repository contains code for the paper "Decoupling Representation and Classifier for Long-Tailed Recognition", published at ICLR 2020

OverFeat is a Convolutional Network-based image classifier and feature extractor.

Optimal Adaptive Allocation using Deep Reinforcement Learning in a Dose-Response Study

Official pytorch implementation of "Feature Stylization and Domain-aware Contrastive Loss for Domain Generalization" ACMMM 2021 (Oral)

A complete speech segmentation system using Kaldi and x-vectors for voice activity detection (VAD) and speaker diarisation.

Optical machine for senses sensing using speckle and deep learning

Sequence-tagging using deep learning

The PASS dataset: pretrained models and how to get the data - PASS: Pictures without humAns for Self-Supervised Pretraining

A python script to lookup Passport Index Dataset

Spatial Intention Maps for Multi-Agent Mobile Manipulation (ICRA 2021)

An investigation project for SISR.

Adversarial Framework for (non-) Parametric Image Stylisation Mosaics

This repository contains the code for the paper "Hierarchical Motion Understanding via Motion Programs"

HomeAssitant custom integration for dyson