Implementation of GGB color space

Related tags

Deep Learningpythonopencvimage-processingpillowmedical-image-processingskimageggb-color
Overview

GGB Color Space

PyPI license Travis CI docker codecov

This package is implementation of GGB color space from Development of a Robust Algorithm for Detection of Nuclei and Classification of White Blood Cells in Peripheral Blood Smear Image.

Installation

Install GGB

This package could be installed via PyPI.

pip3 install ggb

or manually:

python3 setup.py install

Building Docker Image

Dockerfile is also provided in this project. To build the image:

cd docker/
bash docker.build.sh

or pull it directly from Docker Hub:

docker pull reshalfahsi/ggb

Building the Documentation

The documentations to this package could be built using Sphinx.

cd docs/
pip3 install -r requirements.txt
make html

The HTML pages are in docs/build/html.

Quick Demo

This package supports various computer vision libraries such as OpenCV and PIL. Complete examples for these computer vision libraries are provided in here. For the short example in Python3:

# import the package and its necessary components
from ggb import GGB, ColorSpace

# we are using OpenCV
import cv2

import urllib.request as urllib
import numpy as np

# load image from internet
req = urllib.urlopen('https://github.com/reshalfahsi/GGB/raw/master/docs/img/leukocytes.png')
arr = np.asarray(bytearray(req.read()), dtype=np.uint8)
img = cv2.imdecode(arr, -1)
    
# convert to GGB Color
ggb_image = GGB(image=img, input_color=ColorSpace.BGR).process()

# show the result    
ggb_image.show()

# save the image to OpenCV format
img = ggb_image.write()

This package also could be run through CLI:

ggb /path/to/image --output /path/to/output

Result

Leukocytes

alt text

Fundus

alt text

Car

alt text

You might also like...
Fast Soft Color Segmentation
Fast Soft Color Segmentation

Fast Soft Color Segmentation

null 3 Oct 29, 2022
Spatial color quantization in Rust
Spatial color quantization in Rust

rscolorq Rust port of Derrick Coetzee's scolorq, based on the 1998 paper "On spatial quantization of color images" by Jan Puzicha, Markus Held, Jens K

Collyn O'Kane 37 Dec 22, 2022
Rendering color and depth images for ShapeNet models.
Rendering color and depth images for ShapeNet models.

Color & Depth Renderer for ShapeNet This library includes the tools for rendering multi-view color and depth images of ShapeNet models. Physically bas

Yinyu Nie 41 Dec 19, 2022
3DMV jointly combines RGB color and geometric information to perform 3D semantic segmentation of RGB-D scans.
3DMV jointly combines RGB color and geometric information to perform 3D semantic segmentation of RGB-D scans.

3DMV 3DMV jointly combines RGB color and geometric information to perform 3D semantic segmentation of RGB-D scans. This work is based on our ECCV'18 p

Владислав Молодцов 0 Feb 6, 2022
A very simple baseline to estimate 2D & 3D SMPL-compatible keypoints from a single color image.
A very simple baseline to estimate 2D & 3D SMPL-compatible keypoints from a single color image.

Minimal Body A very simple baseline to estimate 2D & 3D SMPL-compatible keypoints from a single color image. The model file is only 51.2 MB and runs a

Yuxiao Zhou 49 Dec 5, 2022
A minimal solution to hand motion capture from a single color camera at over 100fps. Easy to use, plug to run.
A minimal solution to hand motion capture from a single color camera at over 100fps. Easy to use, plug to run.

Minimal Hand A minimal solution to hand motion capture from a single color camera at over 100fps. Easy to use, plug to run. This project provides the

Yuxiao Zhou 824 Jan 7, 2023
An end-to-end image translation model with weight-map for color constancy
An end-to-end image translation model with weight-map for color constancy

CCUnet An end-to-end image translation model with weight-map for color constancy 1. Download the dataset (take Colorchecker_recommended dataset as an

Jianhui Qiu 1 Dec 21, 2021
Blender Add-on that sets a Material's Base Color to one of Pantone's Colors of the Year
Blender Add-on that sets a Material's Base Color to one of Pantone's Colors of the Year

Blender PCOY (Pantone Color of the Year) MCMC (Mid-Century Modern Colors) HG71 (House & Garden Colors 1971) Blender Add-ons That Assign a Custom Color

Don Schnitzius 15 Nov 20, 2022
PyTorch implementation of paper
PyTorch implementation of paper "Neural Scene Flow Fields for Space-Time View Synthesis of Dynamic Scenes", CVPR 2021

Neural Scene Flow Fields PyTorch implementation of paper "Neural Scene Flow Fields for Space-Time View Synthesis of Dynamic Scenes", CVPR 20

Zhengqi Li 585 Jan 4, 2023
Comments
  • v1.1.2 release

    v1.1.2 release

    • GGBImage can not be called directly from ggb module.
    • Add ggb.testing module.
    • Move ggb.utils.test module to ggb.testing.base module.
    • Add get_image_from_url function in the ggb.testing.base module.
    • Add process method in the ggb.backend module.
    • Rewrite ggb.ggb module.
    • Add ComputerVisionLibraryError exception in the ggb.utils.error module.
    • Tidying up code for documentation.
    opened by reshalfahsi 0
Releases(v1.1.4)
Owner
Resha Dwika Hefni Al-Fahsi
AI Engineer at Techbros Group
Resha Dwika Hefni Al-Fahsi
GitHub Repository https://ggb.readthedocs.io
Pytorch implementation of Depth-conditioned Dynamic Message Propagation forMonocular 3D Object Detection

DDMP-3D Pytorch implementation of Depth-conditioned Dynamic Message Propagation forMonocular 3D Object Detection, a paper on CVPR2021. Instroduction T

Li Wang 32 Nov 09, 2022
A compendium of useful, interesting, inspirational usage of pandas functions, each example will be an ipynb file

Pandas_by_examples A compendium of useful/interesting/inspirational usage of pandas functions, each example will be an ipynb file What is this reposit

Guangyuan(Frank) Li 32 Nov 20, 2022
GAN-based Matrix Factorization for Recommender Systems

GAN-based Matrix Factorization for Recommender Systems This repository contains the datasets' splits, the source code of the experiments and their res

Ervin Dervishaj 9 Nov 06, 2022
torchbearer: A model fitting library for PyTorch

Note: We're moving to PyTorch Lightning! Read about the move here. From the end of February, torchbearer will no longer be actively maintained. We'll

632 Dec 13, 2022
Dashboard for the COVID19 spread

COVID-19 Data Explorer App A streamlit Dashboard for the COVID-19 spread. The app is live at: [https://covid19.cwerner.ai]. New data is queried from G

Christian Werner 22 Sep 29, 2022
Streaming Anomaly Detection Framework in Python (Outlier Detection for Streaming Data)

Python Streaming Anomaly Detection (PySAD) PySAD is an open-source python framework for anomaly detection on streaming multivariate data. Documentatio

Selim Firat Yilmaz 181 Dec 18, 2022
Object Database for Super Mario Galaxy 1/2.

Super Mario Galaxy Object Database Welcome to the public object database for Super Mario Galaxy and Super Mario Galaxy 2. Here, we document all object

Aurum 9 Dec 04, 2022
Parallel Latent Tree-Induction for Faster Sequence Encoding

FastTrees This repository contains the experimental code supporting the FastTrees paper by Bill Pung. Software Requirements Python 3.6, NLTK and PyTor

Bill Pung 4 Mar 29, 2022
NPBG++: Accelerating Neural Point-Based Graphics

[CVPR 2022] NPBG++: Accelerating Neural Point-Based Graphics Project Page | Paper This repository contains the official Python implementation of the p

Ruslan Rakhimov 57 Dec 03, 2022
Synthetic LiDAR sequential point cloud dataset with point-wise annotations

SynLiDAR dataset: Learning From Synthetic LiDAR Sequential Point Cloud This is official repository of the SynLiDAR dataset. For technical details, ple

78 Dec 27, 2022
Image based Human Fall Detection

Here I integrated the YOLOv5 object detection algorithm with my own created dataset which consists of human activity images to achieve low cost, high accuracy, and real-time computing requirements

UTTEJ KUMAR 12 Dec 11, 2022
Churn prediction

Churn-prediction Churn-prediction Data preprocessing:: Label encoder is used to normalize the categorical variable Data Transformation:: For each data

1 Sep 28, 2022
Deep Learning Theory

Deep Learning Theory 整理了一些深度学习的理论相关内容，持续更新。 Overview Recent advances in deep learning theory 总结了目前深度学习理论研究的六个方向的一些结果，概述型，没做深入探讨(2021)。 1.1 complexity

fq 103 Jan 04, 2023
Implementation of Lie Transformer, Equivariant Self-Attention, in Pytorch

Lie Transformer - Pytorch (wip) Implementation of Lie Transformer, Equivariant Self-Attention, in Pytorch. Only the SE3 version will be present in thi

Phil Wang 78 Oct 26, 2022
Contrastive Learning for Metagenomic Binning

CLMB A simple framework for CLMB - a novel deep Contrastive Learningfor Metagenomic Binning Created by Pengfei Zhang, senior of Department of Computer

1 Sep 14, 2022
Phy-Q: A Benchmark for Physical Reasoning

Phy-Q: A Benchmark for Physical Reasoning Cheng Xue*, Vimukthini Pinto*, Chathura Gamage* Ekaterina Nikonova, Peng Zhang, Jochen Renz School of Comput

29 Dec 19, 2022
A data-driven approach to quantify the value of classifiers in a machine learning ensemble.

Documentation | External Resources | Research Paper Shapley is a Python library for evaluating binary classifiers in a machine learning ensemble. The

Benedek Rozemberczki 188 Dec 29, 2022
Tensorflow implementation of soft-attention mechanism for video caption generation.

SA-tensorflow Tensorflow implementation of soft-attention mechanism for video caption generation. An example of soft-attention mechanism. The attentio

Paul Chen 153 Nov 14, 2022
Scale-aware Automatic Augmentation for Object Detection (CVPR 2021)

SA-AutoAug Scale-aware Automatic Augmentation for Object Detection Yukang Chen, Yanwei Li, Tao Kong, Lu Qi, Ruihang Chu, Lei Li, Jiaya Jia [Paper] [Bi

DV Lab 182 Dec 29, 2022
[ICCV'21] NEAT: Neural Attention Fields for End-to-End Autonomous Driving

NEAT: Neural Attention Fields for End-to-End Autonomous Driving Paper | Supplementary | Video | Poster | Blog This repository is for the ICCV 2021 pap

254 Jan 02, 2023